For context:

I’m copying the same files to the same USB drive for comparison from Windows and from my Fedora 41 Workstation.

Around 10k photos.

Windows PC: Dual Core AMD Athlon from 2009, 4GB RAM, old HDD, takes around 40min to copy the files to USB

Linux PC: 5800X3D, 64GB RAM, NVMe SSD, takes around 3h to copy the same files to the same USB stick

I’ve tried chagning from NTFS to exFAT but the same result. What can I do to improve this? It’s really annoying.

25 points
*

I find that it’s around the same, except linux waits on updating the UI until all write buffers are flushed, whereas Windows does not.

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9 points
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except linux waits on updating the UI until all write buffers are flushed, whereas Windows does not.

I wish that were true here. But when I copy to USB the file manager ( XFCE/Thunar ) shows the copy is finished and closes the copy notifications way way before it’s even half done, when I copy movies to a stick.
I use fast USB 3 stick on USB 3 port, and I don’t get anywhere near the write speed the stick manufacturer claims. So I always open a terminal and run sync, to see when it’s actually finished.

I hate to the extreme when systems don’t account for write cache before claiming a copy is finished, it’s such an ancient problem we’ve had since the 90’s, and I find it embarrassing that such problems still exist on modern systems.

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2 points

I’ve ran sync and it exited already 4 times and the copy is still going

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2 points

Yes that’s annoying too, I have no clue why it does that, but when the sync says “clear”, I always wait a couple seconds, and run sync again a couple of times, to see if it’s actually finished. And only THEN unmount the stick.
Copy to USB does not seem very solid on Linux IMO. So I also ALWAYS buy sticks with activity LED.
But even that can fool you, sometimes when I think a smaller copy is finished, because the LED stops blinking, it suddenly starts up again, after having paused for about 1½ second?!?!

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3 points

That’s nice but I managed to copy 300GB worth of data from the Windows PC to my Linux PC in around 3h to make a backup while I reinstall system and now I’ve been stuck for half a day copying the data back to the old Windows PC and I’ve not even finished 100GB yet… I’ve noticed this issue long ago but I ignored it as I never really had to copy this much data. Now it’s just infuriating.

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14 points

One thing I ran into, though it was a while ago, was that disk caching being on would trash performance for writes on removable media for me.

The issue ended up being that the kernel would keep flushing the cache to disk, and while it was doing that none of your transfers are happening. So, it’d end up doubling or more the copy time because the write cache wasn’t actually helping removable drives.

It might be worth remounting without any caching, if it’s on, and seeing if that fixes the mess.

But, as I said, this has been a few years, so that may no longer be actively the case.

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8 points
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This actually sounds like it could be the case, I’ll explore tomorrow as I’m already in bed. Thanks for suggestion.

Edit: disabling caching yielded an improvement but very minor, writing to USB stick still sucks

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22 points
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Silly question perhaps, but are you sure you’re using the correct port on your Linux system? If I plug my external HD into a USB2 port, I’m stuck at 30-40MB/sec, while on a USB3 port I get ~150-180MB/sec. That’s proportionally similar to the difference you described so I wonder if that’s the culprit.

You can verify this in a few different ways. From Terminal, if you run lsusb you’ll see a list of all your USB hubs and devices.

It should look something like this:

Bus 002 Device 001: ID xxxx:yyyy Linux Foundation 3.0 root hub
Bus 002 Device 002: ID xxxx:yyyy <HDD device name>
Bus 003 Device 001: ID xxxx:yyyy Linux Foundation 2.0 root hub
Bus 004 Device 001: ID xxxx:yyyy Linux Foundation 3.0 root hub

So you can see three hubs, one of which is 2.0 and the other two are 3.0. The HDD is on bus 002, which we can see is a USB 3.0 hub by looking at the description of Bus 002 Device 001. That’s good.

If you see it on a 2.0 bus, or on a bus with many other devices on it, that’s bad and you should re-organize your USB devices so your low-speed peripherals (mouse, keyboard, etc.) are on a USB2 bus and only high-speed devices are on the USB3 bus.

You can also consult your motherboard’s manual, or just look at the colors of your USB ports. By convention, gray ports are USB 1.0, blue ports are 2.0, and green ports are 3.x.

If you’re running KDE, you can also view these details in the GUI with kinfocenter. Not sure what the Gnome equivalent is.

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6 points

For sanity check I’ve tried.

Bus 004 Device 004 and it’s USB 3.0 as it should be.

Also I’ve disabled caching and I’m now copying 6 video files at only just 15MB/s (and it’s slowing down, byt the time I went to make screenshot for this post it dropped again). And it’s quite a bit slower than on Windows still.

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3 points
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Now down to 9MB/s and still going down

EDIT: 12 min later…

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2 points

Still going…

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5 points

I’m using USB 3 10Gbps on my Linux system. The USB stick is USB 3-1.0 and the Windows PC only has USB 2.0 so it should be the slowest but it’s actually several times faster.

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17 points

I/O scheduler issue?

Connect that USB stick, and run command:

grep '' /sys/block/*/queue/scheduler

show output.

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4 points

Can I run it while transferring?

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2 points

Sure!

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2 points

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4 points

I see nothing wrong here. So issue must be somewhere else.

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14 points

rsync -aP <source>/ <dest>

I find it faster and more reliable than most GUI explorers

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5 points

-avP

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3 points

I do -azP for compression

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2 points

compression is good when copying over the network, but would just waste cpu time when copying to a usb stick.

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1 point

that’s good if your data is not already compressed, otherwise is more of a CPU waste

images, videos, audio, game assets, standardized data files, and a bunch of other things are likely already compressed.

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10 points
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That’s just the state of things. I have experienced this as well, trying to copy a 160 GB usb stick to another one (my old itunes library). Windows manages fine, but neither Linux nor MacOS do it properly. They crawl, and in macos’ case, it gets much slower as time goes by, and I had to stop the transfer. Overall, it’s how these things are implemented. It’s ok for a few gigabytes, but not a good case for many small files (e.g. 3-5 mb each) with many subfolders, and many GBs overall. Seems to me that some cache is overfilling, while windows is more diligent to clear up that cache in time, before things get into a crawl. Just a weak implementation for both Linux and MacOS IMHO, and while I’m a full time Linux user, I’m not afraid to say it how I experienced it under a debian and ubuntu.

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